ClaRNA

Doublet Group info: classifier/stacking/<</UC/sub-006

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</UC/sub-006
Members:
count: 28
download members
1M90:A1978:A1977
1K8A:A1416:A1415
3OHD:A822:A821
2OTJ:01978:01977
1FFK:01931:01930
3CCE:01978:01977
3CC4:01978:01977
1VQN:01416:01415
1QVG:01416:01415
3CCE:01912:01911
3G71:0241:0240
3U5D:11477:11476
1K8A:A1087:A1086
2OTL:02128:02127
1JJ2:01087:01086
3OGY:A543:A542
3R8O:A321:A320
3KNI:A524:A523
1Q81:A1087:A1086
2ZJR:X1988:X1987
2DLC:Y57:Y56
1XMQ:A183:A182
1YJ9:0583:0582
2CSX:D33:D32
1K9M:A1437:A1436
3CXC:01775:01774
1VQO:01775:01774
1N8R:A1775:A1774
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 4 0.096
base-phosphate/H_0BPh 3 0.126
base-ribose/H_9BR 2 0.126
base-phosphate/H_9BPh 2 0.160
stacking/>> 10 0.161
base-phosphate/H_8BPh 19 0.202
base-ribose/SW_2BR 2 0.257
base-ribose/S_1BR 10 0.277
base-phosphate/W_3BPh 5 0.277
stacking/<< 5 0.278

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol