ClaRNA

Doublet Group info: classifier/stacking/<</UC/sub-008

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <</UC/sub-008
Members:
count: 24
download members
1QVG:02003:02002
1YJ9:02003:02002
3CD6:02003:02002
1KD1:A2544:A2543
3CCQ:02544:02543
2OTJ:02544:02543
1M90:A2544:A2543
1Q81:A2544:A2543
1VQ6:02544:02543
3CPW:02003:02002
1VQL:02003:02002
1VQ5:02003:02002
2VQE:A1457:A1456
1VQ9:01235:01234
1QVG:01235:01234
1K8A:A1235:A1234
1N8R:A1235:A1234
2UXC:A377:A376
1YJN:0269:0268
3OI0:A822:A821
2J03:A2524:A2523
2J01:A2524:A2523
1YHQ:0269:0268
301D:A6:A5
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/>> 5 0.094
stacking/<< 1 0.118
stacking/<> 17 0.125
base-phosphate/H_8BPh 19 0.154
base-phosphate/H_0BPh 62 0.237
base-phosphate/H_9BPh 7 0.249
base-ribose/H_9BR 2 0.252
base-ribose/W_5BR 57 0.259
base-phosphate/W_3BPh 8 0.272
base-phosphate/W_6BPh 5 0.314

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol