sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJ9-01949-01948
X
>1XMQ-A953-A952
X
>2OTJ-01949-01948
X
>3R9W-B31-B30
X
>1VQL-0125-0124
X
>1M90-A125-A124
X
>1Q86-A125-A124
X
>1K8A-A125-A124
X
>3CC2-0125-0124
X
</seq>
<hsp>
0 1:0.762508774484
0 2:0.297560312338
0 3:0.949807518375
0 4:0.877554495371
0 5:0.820870725211
0 6:0.928238771664
0 7:0.952767274212
0 8:0.961956748781
1 2:0.661447854682
1 3:0.729843925665
1 4:1.0
1 5:0.90286377746
1 6:0.989501370007
1 7:0.989395275583
1 8:0.982011384446
2 3:0.816533724849
2 4:0.797915288428
2 5:0.750610242952
2 6:0.869255520374
2 7:0.89002821136
2 8:0.864246964808
3 4:0.570787918848
3 5:0.476228090432
3 6:0.557763066673
3 7:0.472656544559
3 8:0.455913585971
4 5:0.175766082929
4 6:0.218917658972
4 7:0.249815970936
4 8:0.177246331354
5 6:0.149180092745
5 7:0.156935295514
5 8:0.184488599911
6 7:0.154554010721
6 8:0.206629054931
7 8:0.166365648977
</hsp>