sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A418-A417
X
>3OHJ-A418-A417
X
>3U5H-52488-52487
X
>1HC8-D7-D6
X
>3CMA-0896-0895
X
>3CME-0896-0895
X
>1YIJ-0896-0895
X
>1VQL-0896-0895
X
</seq>
<hsp>
0 1:0.614523582372
0 2:0.492527941077
0 3:0.665322424466
0 4:0.308269078221
0 5:0.447914326358
0 6:0.373960762267
0 7:0.384136869931
1 2:0.920967579482
1 3:0.999995712808
1 4:0.641199300764
1 5:0.795574267246
1 6:0.714563212796
1 7:0.648764845212
2 3:0.531405023183
2 4:0.469308021687
2 5:0.441965804145
2 6:0.477424726161
2 7:0.444428673222
3 4:0.584418664195
3 5:0.417897882586
3 6:0.6427102567
3 7:0.515731494578
4 5:0.249977933798
4 6:0.189427666162
4 7:0.198689665684
5 6:0.245583446212
5 7:0.187732885743
6 7:0.218439287247
</hsp>