sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2ZJR-X577-X576
X
>1VQK-954-953
X
>3CCS-02154-02153
X
>1YIT-954-953
X
>1QVG-02154-02153
X
>3D2V-B58-B57
X
>1VQO-02154-02153
X
>1FG0-A145-A144
X
</seq>
<hsp>
0 1:0.775079851472
0 2:0.953264147602
0 3:0.970412936641
0 4:0.977550049634
0 5:0.962263322713
0 6:0.999996321567
0 7:0.992130366183
1 2:0.688837176031
1 3:0.420630292423
1 4:0.741135219806
1 5:0.903449386499
1 6:0.71148906661
1 7:0.708074773532
2 3:0.468462004239
2 4:0.307884398175
2 5:0.347380331909
2 6:0.228553303478
2 7:0.281251974934
3 4:0.648460942942
3 5:0.746969000413
3 6:0.563268811735
3 7:0.563910862748
4 5:0.381044653863
4 6:0.157682179071
4 7:0.237235354474
5 6:0.340475498163
5 7:0.321743338022
6 7:0.115176182668
</hsp>