sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1L9A-B22-B21
X
>1QRU-B35-B34
X
>3U5H-52000-51999
X
>3RG5-A7-A6
X
>3CCJ-0193-0192
X
>3L3C-P100-P99
X
>1VQ7-0193-0192
X
</seq>
<hsp>
0 1:0.465894274008
0 2:0.729048566804
0 3:0.875487598974
0 4:0.999991109852
0 5:0.634017346089
0 6:0.954776125495
1 2:0.67695588238
1 3:0.628764206493
1 4:0.754430774205
1 5:0.643490689029
1 6:0.776390907986
2 3:0.525265912913
2 4:0.752568025528
2 5:0.227846832927
2 6:0.471970700952
3 4:0.471604548782
3 5:0.503615321387
3 6:0.314201697293
4 5:0.766535863556
4 6:0.404675434814
5 6:0.489398336178
</hsp>