sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CC2-0891-01314
X
>1YIT-0891-01314
X
>1NJI-A891-A1314
X
>1N8R-A891-A1314
X
>3CCJ-0891-01314
X
>1QVG-0891-01314
X
>1GID-A156-A2
X
</seq>
<hsp>
0 1:0.266868887957
0 2:0.319414151571
0 3:0.538340393388
0 4:0.73278769535
0 5:0.567482208308
0 6:0.973104197147
1 2:0.244133431359
1 3:0.382387524772
1 4:0.626517771787
1 5:0.357839092981
1 6:0.818233262847
2 3:0.482148534446
2 4:0.646878366483
2 5:0.454639184144
2 6:0.846587524411
3 4:0.662003047615
3 5:0.377633891466
3 6:0.888562849033
4 5:0.411973482052
4 6:1.0
5 6:0.7250524127
</hsp>