sequences=22
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1QRT-B36-B35
X
>3L3C-R114-R113
X
>1YHQ-01178-01177
X
>1VTQ-A11-A10
X
>1K8A-A1974-A1973
X
>1VQL-01178-01177
X
>1FJG-A76-A75
X
>3G6E-01178-01177
X
>3OHJ-A1759-A1758
X
>3CC2-01178-01177
X
>2J02-A1368-A1367
X
>1VQ5-969-968
X
>3U5H-535-534
X
>2VQF-A395-A394
X
>1VQ9-01178-01177
X
>1VQM-01257-01256
X
>3U5D-1277-1276
X
>3G9C-Q69-Q68
X
>3OHC-A656-A655
X
>2ZJR-X876-X875
X
>3OHZ-A2323-A2322
X
>2J00-A1099-A1098
X
</seq>
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