sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q82-B111-B110
X
>1VQ9-9111-9110
X
>1K8A-B111-B110
X
>1VQ8-9111-9110
X
>3CME-9111-9110
X
>1XMQ-A929-A928
X
>3OI0-A929-A928
X
>3U5H-52773-52772
X
>1FJG-A929-A928
X
>1YJW-0199-0198
X
>1VQ7-01179-01178
X
>3SQW-B3-B2
X
>3OHZ-A2075-A2074
X
>1QRT-B30-B29
X
>1Y39-D15-D14
X
>1Y39-C15-C14
X
>1YHQ-0548-0547
X
>3CD6-0548-0547
X
</seq>
<hsp>
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0 2:0.0780856679445
0 3:0.14779276489
0 4:0.427354032892
0 5:0.368233636865
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16 17:0.308624504395
</hsp>