sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHJ-A2177-A2175
X
>3OHK-A2177-A2175
X
>2J03-A2224-A2222
X
>3CCR-02222-02220
X
>2J01-A2224-A2222
X
>3OHZ-A2177-A2175
X
>3OH5-A2177-A2175
X
>3OI1-A2177-A2175
X
>2ZJR-X2134-X2132
X
</seq>
<hsp>
0 1:0.075091158448
0 2:0.822308065195
0 3:1.0
0 4:0.804794734031
0 5:0.298716994149
0 6:0.41397087797
0 7:0.347735553395
0 8:0.568291297698
1 2:0.83421409239
1 3:0.989131816747
1 4:0.816304741533
1 5:0.315454629576
1 6:0.440503008904
1 7:0.361855653627
1 8:0.571588553243
2 3:0.720878891664
2 4:0.0542097162682
2 5:0.635511426924
2 6:0.661416328498
2 7:0.597215644373
2 8:0.545040716396
3 4:0.719143964604
3 5:0.891400029409
3 6:0.97951535213
3 7:0.882377611634
3 8:0.864947976751
4 5:0.617288802881
4 6:0.637805890567
4 7:0.578582987524
4 8:0.512188567485
5 6:0.230449522217
5 7:0.0726617963689
5 8:0.370178532435
6 7:0.23010189358
6 8:0.413058739113
7 8:0.340050951285
</hsp>