sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J03-A894-A893
X
>2J01-A894-A893
X
>3OH7-A894-A893
X
>3OH5-A894-A893
X
>3OHZ-A894-A893
X
>3OI1-A894-A893
X
>3OHK-A894-A893
X
>3OHJ-A894-A893
X
</seq>
<hsp>
0 1:0.0405051719994
0 2:0.996918444914
0 3:1.0
0 4:0.680226188776
0 5:0.661745724467
0 6:0.736265479191
0 7:0.754255319943
1 2:0.982143982288
1 3:0.984992509728
1 4:0.66582665353
1 5:0.649794327671
1 6:0.734636312522
1 7:0.751063705844
2 3:0.0142695144267
2 4:0.754276320838
2 5:0.769159897673
2 6:0.56218957451
2 7:0.540219431006
3 4:0.753308564978
3 5:0.768688676151
3 6:0.56445470896
3 7:0.542190725821
4 5:0.0511690645358
4 6:0.410913543326
4 7:0.405130568773
5 6:0.39556213371
5 7:0.393293475745
6 7:0.0373250918425
</hsp>