sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNH-A1302-A1267
X
>3F1E-A1311-A1276
X
>3F1G-A1311-A1276
X
>3OHY-A1311-A1276
X
>3OI0-A1311-A1276
X
>3OGE-A1311-A1276
X
>3OGY-A1311-A1276
X
</seq>
<hsp>
0 1:0.430420817954
0 2:0.434613712976
0 3:0.807231543625
0 4:0.803491113544
0 5:0.999077991248
0 6:0.999994021789
1 2:0.021573812202
1 3:0.530255016987
1 4:0.523106651152
1 5:0.684634908419
1 6:0.685323819689
2 3:0.535658854109
2 4:0.528453793644
2 5:0.68308054832
2 6:0.683484606734
3 4:0.0185906907286
3 5:0.436650748149
3 6:0.446241931402
4 5:0.442046277053
4 6:0.451415453528
5 6:0.0159562753566
</hsp>