sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A1117-A1115
X
>2VQE-A1117-A1115
X
>2VQF-A1117-A1115
X
>1FJG-A1117-A1115
X
>2UUA-A1117-A1115
X
>2UXC-A1117-A1115
X
>2UUB-A1117-A1115
X
</seq>
<hsp>
0 1:0.800641947595
0 2:0.800641947595
0 3:0.499482363016
0 4:0.670238959171
0 5:1.0
0 6:0.831040783017
1 2:1.46767134988e-06
1 3:0.520836883759
1 4:0.258062765842
1 5:0.42530650738
1 6:0.35298142066
2 3:0.520836883759
2 4:0.258062765842
2 5:0.42530650738
2 6:0.35298142066
3 4:0.460196285705
3 5:0.563760044669
3 6:0.429700644794
4 5:0.463437982828
4 6:0.365042256761
5 6:0.270348208704
</hsp>