ClaRNA

Doublet Group info: classifier/stacking/<>/CA/sub-002

distance statistics     members distance graph (clans)     superimpose     cluster

Details

N. type: None
Program used: None
Category: classifier
SubCategory: stacking
Desc: <>/CA/sub-002
Members:
count: 47
download members
3F1F:A1024:A1162
3F1H:A1024:A1162
3OH5:A1006:A1092
2QA4:01060:01205
3I56:01061:01206
3OH7:A1006:A1092
3R8T:A998:A1136
1YJ9:01061:01206
2J01:A1006:A1092
3KNK:A1011:A1097
3G71:01061:01206
1YJN:01061:01206
1QVG:01061:01206
3CCV:01061:01206
3CXC:01061:01206
3CPW:01061:01206
1VQ6:01061:01206
1Q86:A1061:A1206
1YJW:01061:01206
1YI2:01061:01206
1YIT:01061:01206
2ZJR:X918:X1056
3CCQ:01061:01206
1VQM:01061:01206
1KD1:A1061:A1206
2OTL:01061:01206
3OHK:A1006:A1092
1JJ2:01061:01206
1VQP:01061:01206
3CC4:01061:01206
3CC2:01061:01206
3CD6:01061:01206
1S72:01061:01206
1VQ8:01061:01206
1Q82:A1061:A1206
1VQ7:01061:01206
1VQN:01061:01206
3OHJ:A1006:A1092
1VQL:01061:01206
1YIJ:01061:01206
1VQ9:01061:01206
3OI1:A1006:A1092
2OTJ:01061:01206
3CCE:01061:01206
1VQ5:01061:01206
1M90:A1061:A1206
3KNI:A1012:A1098
Closest classifer groups: show all      show selected
Group Members RMSD
stacking/<> 1 0.098
base-phosphate/H_9BPh 3 0.117
stacking/>> 1 0.131
base-phosphate/H_0BPh 6 0.168
stacking/<< 1 0.203
base-ribose/H_9BR 4 0.205
base-ribose/H_7BR 20 0.229
base-phosphate/H_7BPh 7 0.252
base-phosphate/H_8BPh 18 0.275
base-ribose/H_0BR 2 0.286

Extra

PDB:download
Reference image (generated by PyMOL):
pymol image
show in jmol
All members (generated by PyMOL):
pymol image
show in jmol