sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1GID-A86-A84
X
>3U5D-11143-11144
X
>3U5H-51149-51150
X
>2CV0-D8-D45
X
>1N78-D8-D45
X
>2DXI-D8-D45
X
>2CV2-D8-D45
X
>2CV1-D8-D45
X
>2DXI-C8-C45
X
>2CV2-C8-C45
X
>1N77-D8-D45
X
>2CV0-C8-C45
X
>1N77-C8-C45
X
</seq>
<hsp>
0 1:0.936936742914
0 2:0.751821325121
0 3:0.334061308541
0 4:0.454680763971
0 5:0.370105292969
0 6:0.369602959548
0 7:0.400947924879
0 8:0.403370790756
0 9:0.381575766712
0 10:0.513150425718
0 11:0.403719372354
0 12:0.564932881282
1 2:0.273510511421
1 3:0.989665382253
1 4:0.886674699601
1 5:1.0
1 6:0.99669253396
1 7:0.970813857542
1 8:0.869732539143
1 9:0.854460788476
1 10:0.824140472718
1 11:0.846679393759
1 12:0.792966114869
2 3:0.80668088208
2 4:0.706917648638
2 5:0.825406805666
2 6:0.835147023657
2 7:0.806430459472
2 8:0.714996875622
2 9:0.699747258617
2 10:0.656598188186
2 11:0.698243821921
2 12:0.649805317544
3 4:0.24861271974
3 5:0.104669516897
3 6:0.108317945101
3 7:0.21346224421
3 8:0.211060704715
3 9:0.175367224688
3 10:0.287818975878
3 11:0.215347917042
3 12:0.360199495152
4 5:0.215232297719
4 6:0.287267340717
4 7:0.315803908421
4 8:0.194909939914
4 9:0.246259238736
4 10:0.183171448098
4 11:0.204775650045
4 12:0.274972678762
5 6:0.140925997386
5 7:0.169820486414
5 8:0.193440871971
5 9:0.197653307498
5 10:0.26666016674
5 11:0.208291263592
5 12:0.335118350701
6 7:0.224813101018
6 8:0.183314900385
6 9:0.16056996106
6 10:0.312144133631
6 11:0.18293569541
6 12:0.355234855006
7 8:0.240426835564
7 9:0.238279854957
7 10:0.27665307768
7 11:0.261715693989
7 12:0.298895065773
8 9:0.151596457018
8 10:0.213384498583
8 11:0.066304625761
8 12:0.227715512688
9 10:0.22836998998
9 11:0.115662728668
9 12:0.266138219362
10 11:0.221122145497
10 12:0.132064625561
11 12:0.239460510741
</hsp>