sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2CT8-D48-D21
X
>3L0U-A47-A20
X
>4TRA-A47-A20
X
>3R8T-A1831-A1891
X
>2CSX-C48-C21
X
>3F1H-B108-B65
X
>3F1F-B108-B65
X
>2FK6-R27-R20
X
</seq>
<hsp>
0 1:0.700288613071
0 2:0.661526921626
0 3:0.69038273047
0 4:0.573004545015
0 5:0.929901249108
0 6:0.924390277691
0 7:1.0
1 2:0.588114368908
1 3:0.198816046514
1 4:0.684320416302
1 5:0.62550636767
1 6:0.619533691396
1 7:0.583673979829
2 3:0.566569162869
2 4:0.474746204416
2 5:0.442623068569
2 6:0.435287901919
2 7:0.746437958672
3 4:0.694505891419
3 5:0.641410414374
3 6:0.633127302156
3 7:0.598131081561
4 5:0.526673566461
4 6:0.526879913541
4 7:0.691219361255
5 6:0.021417145708
5 7:0.524697447322
6 7:0.515355753331
</hsp>