sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHZ-A2496-A2495
X
>3OI1-A2496-A2495
X
>3OH5-A2496-A2495
X
>3OH7-A2496-A2495
X
>3U5H-52265-52264
X
>3G8T-E11-E10
X
>1WSU-F18-F17
X
</seq>
<hsp>
0 1:0.0555250437012
0 2:0.225342040122
0 3:0.227206190981
0 4:0.99999748006
0 5:0.907660879161
0 6:0.999693031845
1 2:0.220644195921
1 3:0.211948582816
1 4:0.995806656295
1 5:0.88549607344
1 6:0.979181846541
2 3:0.0487422313886
2 4:0.869101616501
2 5:0.76643308601
2 6:0.85018723149
3 4:0.871967829481
3 5:0.747128036101
3 6:0.832443857317
4 5:0.764465139337
4 6:0.912542278635
5 6:0.451022248229
</hsp>