sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2QA4-02484-01795
X
>3CCM-02485-01796
X
>3CD6-02485-01796
X
>3CCV-02485-01796
X
>3CCJ-02485-01796
X
>1QVG-02485-01796
X
>3I56-02485-01796
X
>1YJ9-02485-01796
X
>1VQ6-02485-01796
X
>3CXC-02485-01796
X
>1N8R-A2485-A1796
X
</seq>
<hsp>
0 1:1.0
0 2:0.830819156972
0 3:0.695837464886
0 4:0.47558039831
0 5:0.507699293112
0 6:0.450202383942
0 7:0.628651443977
0 8:0.638090935134
0 9:0.542188230298
0 10:0.590725388637
1 2:0.373120152539
1 3:0.841919325483
1 4:0.968420993248
1 5:0.714781830531
1 6:0.801856082688
1 7:0.719305864608
1 8:0.751150030662
1 9:0.803267149814
1 10:0.815933572941
2 3:0.544023761312
2 4:0.757681878957
2 5:0.439677196454
2 6:0.597808023991
2 7:0.507132790492
2 8:0.569737673502
2 9:0.613981524359
2 10:0.63899996834
3 4:0.44563502479
3 5:0.335236147852
3 6:0.498819132109
3 7:0.377355050777
3 8:0.401510599606
3 9:0.46487610737
3 10:0.408294642066
4 5:0.354321716978
4 6:0.291853548603
4 7:0.312329711131
4 8:0.289090987155
4 9:0.247149950654
4 10:0.329031748896
5 6:0.236232870775
5 7:0.226213331408
5 8:0.293798159514
5 9:0.267986608893
5 10:0.366059564529
6 7:0.258498037531
6 8:0.297996627566
6 9:0.175823180893
6 10:0.325359422769
7 8:0.104712805724
7 9:0.173909099415
7 10:0.312612463534
8 9:0.161193017384
8 10:0.279104471363
9 10:0.276863616033
</hsp>