sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51382-5893
X
>3U5D-11376-1887
X
>3R8S-A1244-A810
X
>3KNK-A1205-A818
X
>3OHZ-A1200-A819
X
>3OH7-A1200-A819
X
>3OI1-A1200-A819
X
>3OH5-A1200-A819
X
>3OHJ-A1200-A819
X
>3OHK-A1200-A819
X
>1MZP-B6-B13
X
</seq>
<hsp>
0 1:0.174404084759
0 2:0.371599505749
0 3:0.403863777379
0 4:0.602753073435
0 5:0.671328309885
0 6:0.645383442278
0 7:0.635044676874
0 8:0.613813385143
0 9:0.633519739308
0 10:0.999998551307
1 2:0.467301602012
1 3:0.423276339533
1 4:0.606395663288
1 5:0.654302252854
1 6:0.639572637301
1 7:0.610693457169
1 8:0.600152187984
1 9:0.617812061549
1 10:0.959252856967
2 3:0.260949549763
2 4:0.394983739076
2 5:0.615416920181
2 6:0.459029725643
2 7:0.606156308775
2 8:0.533430980593
2 9:0.552969356262
2 10:0.894713392043
3 4:0.346144866573
3 5:0.502537230736
3 6:0.404401880938
3 7:0.494469893247
3 8:0.492281940738
3 9:0.499733024838
3 10:0.766620594266
4 5:0.382811645551
4 6:0.0947351345868
4 7:0.383361880242
4 8:0.282041434649
4 9:0.29125106823
4 10:0.56741595961
5 6:0.34408989417
5 7:0.0685054055657
5 8:0.252686334395
5 9:0.221800004037
5 10:0.399255084896
6 7:0.347633526301
6 8:0.250344854296
6 9:0.248108797274
6 10:0.521165613072
7 8:0.233877283981
7 9:0.20920972416
7 10:0.426156602503
8 9:0.054929743463
8 10:0.470095219488
9 10:0.446783120676
</hsp>