sequences=10
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3DIR-A151-A152
X
>3DIL-A151-A152
X
>3DJ0-A151-A152
X
>3DJ2-A151-A152
X
>3DIX-A151-A152
X
>3DIM-A151-A152
X
>3DIQ-A151-A152
X
>3DIZ-A151-A152
X
>3DIG-X151-X152
X
>2ZJR-X1675-X2396
X
</seq>
<hsp>
0 1:0.240504094703
0 2:0.150436513919
0 3:0.348115859502
0 4:0.241193403668
0 5:0.134969563909
0 6:0.327634216974
0 7:0.332282591794
0 8:0.372586253241
0 9:0.939441387552
1 2:0.314308212331
1 3:0.41794189549
1 4:0.215614367611
1 5:0.25035472828
1 6:0.291033521668
1 7:0.335689574344
1 8:0.421074844695
1 9:0.87820388989
2 3:0.426154911237
2 4:0.357087731083
2 5:0.138848332716
2 6:0.298062514938
2 7:0.388990849202
2 8:0.334417029706
2 9:1.0
3 4:0.299038899257
3 5:0.358130153163
3 6:0.575813020505
3 7:0.155693048269
3 8:0.415365272248
3 9:0.691339781781
4 5:0.243402827531
4 6:0.367741308239
4 7:0.286124184956
4 8:0.410369203496
4 9:0.767549314841
5 6:0.248469502697
5 7:0.316126849678
5 8:0.268174902081
5 9:0.891823437191
6 7:0.503537872794
6 8:0.383258709181
6 9:0.971296203127
7 8:0.335462261843
7 9:0.687877762406
8 9:0.827391328712
</hsp>