sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61153-61279
X
>3ADD-D21-D71
X
>3RG5-A21-A71
X
>3RG5-B21-B71
X
>3ADC-C21-C69
X
>3ADB-D21-D73
X
>3ADC-D21-D73
X
>3ADD-C21-C69
X
>3ADB-C21-C73
X
</seq>
<hsp>
0 1:0.999982534008
0 2:0.526484345362
0 3:0.633857431225
0 4:0.746767200014
0 5:0.985476610341
0 6:0.870736672941
0 7:0.712052308099
0 8:0.727095682027
1 2:0.559726093222
1 3:0.468229691404
1 4:0.531452105648
1 5:0.189965283445
1 6:0.302960026957
1 7:0.449033334841
1 8:0.476233122001
2 3:0.199687739192
2 4:0.286664310132
2 5:0.515829132964
2 6:0.432228109302
2 7:0.241865440028
2 8:0.31499773544
3 4:0.316093528336
3 5:0.429427940254
3 6:0.328912496124
3 7:0.160326408697
3 8:0.198431773702
4 5:0.443165488321
4 6:0.356337868868
4 7:0.206461821019
4 8:0.315942568266
5 6:0.216093466136
5 7:0.358760404671
5 8:0.376576223953
6 7:0.255595840565
6 8:0.287616940148
7 8:0.143793452673
</hsp>