sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1DDY-G10-G14
X
>1ET4-A10-A14
X
>1ET4-D10-D14
X
>1ET4-E10-E14
X
>1ET4-B10-B14
X
>1ET4-C10-C14
X
>1DDY-A10-A14
X
</seq>
<hsp>
0 1:0.587404344319
0 2:0.523638278369
0 3:0.598358398004
0 4:0.465161985644
0 5:0.741067546477
0 6:1.0
1 2:0.566640880388
1 3:0.636763493914
1 4:0.489450137877
1 5:0.453860736489
1 6:0.771657491271
2 3:0.409395880672
2 4:0.233714194392
2 5:0.451809613878
2 6:0.688504545475
3 4:0.461008387836
3 5:0.522346506565
3 6:0.728764026536
4 5:0.417938101157
4 6:0.739688113907
5 6:0.428596477309
</hsp>