sequences=19
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1JJ2-01669-01665
X
>3CC2-0273-0355
X
>3OHJ-A1257-A1546
X
>1YI2-01669-01665
X
>1VQ4-01669-01665
X
>1Q81-A273-A355
X
>3KNI-A203-A213
X
>3Q3Z-A14-A49
X
>1YJN-0180-0191
X
>1RLG-D19-D5
X
>1QVG-0180-0191
X
>3I56-0180-0191
X
>1S72-0180-0191
X
>1M90-A180-A191
X
>1RLG-C19-C5
X
>3R8S-A1851-A1877
X
>3F1H-A110-A44
X
>3HJW-D31-D23
X
>1NJI-A235-A252
X
</seq>
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