sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5D-12858-12880
X
>1KD1-A319-A333
X
>1K9M-A777-A811
X
>1K8A-A777-A811
X
>1VQN-02596-02564
X
>1VQM-02596-02564
X
>1YIJ-0319-0333
X
>1QVG-01691-01992
X
>3OH5-A1784-A1799
X
>2UXC-A806-A830
X
>1N8R-A1539-A1572
X
>3F1F-A1492-A1539
X
>3OGY-A832-A841
X
>3G6E-01539-01572
X
>1M90-A1539-A1572
X
>1YHQ-01539-01572
X
>3OI1-B104-B71
X
</seq>
<hsp>
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0 2:0.666299235367
0 3:0.529473619859
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0 5:0.463206014875
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15 16:0.575086315513
</hsp>