sequences=14
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8T-A1784-A1821
X
>3F1G-A760-A778
X
>2J02-A760-A778
X
>1KD1-A1805-A1842
X
>1FJG-A422-A400
X
>1QVG-01805-01842
X
>1Q86-A89-A68
X
>1YIJ-01317-0630
X
>3CD6-01317-0630
X
>3OHK-A1303-A1326
X
>1VQ4-01317-0630
X
>1VQP-089-068
X
>1VQ8-089-068
X
>1VQ7-01418-01443
X
</seq>
<hsp>
0 1:0.833610439158
0 2:0.356347969468
0 3:0.323924747356
0 4:0.744211326184
0 5:0.276507697477
0 6:0.6445523602
0 7:0.8325651206
0 8:0.796619286164
0 9:0.675056141327
0 10:0.832954675438
0 11:0.701235397534
0 12:0.761064843129
0 13:0.698729987349
1 2:0.627760419839
1 3:0.880004926209
1 4:0.272296235968
1 5:0.816614084198
1 6:0.671169752813
1 7:0.755153341319
1 8:0.760453635317
1 9:0.582059352697
1 10:0.690185500754
1 11:0.483190117185
1 12:0.426086170923
1 13:0.485326404342
2 3:0.467956342692
2 4:0.499371386488
2 5:0.436230268051
2 6:0.359340409992
2 7:0.668303737193
2 8:0.662708681271
2 9:0.558680103903
2 10:0.67243347905
2 11:0.434985010025
2 12:0.502215180335
2 13:0.524578399102
3 4:0.862451248302
3 5:0.143718195405
3 6:0.729149768094
3 7:1.0
3 8:0.986166756455
3 9:0.767431243642
3 10:0.986167900013
3 11:0.741894971762
3 12:0.784543223958
3 13:0.768855593042
4 5:0.788787270157
4 6:0.499220321721
4 7:0.534689367958
4 8:0.534183598887
4 9:0.4830042908
4 10:0.488523848506
4 11:0.378092340222
4 12:0.372873776853
4 13:0.377395472642
5 6:0.684811724683
5 7:0.896783537722
5 8:0.879472659045
5 9:0.654674942088
5 10:0.876674777431
5 11:0.684627885902
5 12:0.72853614923
5 13:0.664014583878
6 7:0.596525370822
6 8:0.596302828059
6 9:0.622525689639
6 10:0.590693382033
6 11:0.264226451433
6 12:0.346769534006
6 13:0.489765319957
7 8:0.135859786693
7 9:0.400584605688
7 10:0.120774132455
7 11:0.610737966559
7 12:0.668967019294
7 13:0.399377752531
8 9:0.442655384691
8 10:0.14766712405
8 11:0.610733188566
8 12:0.669922720663
8 13:0.425436616186
9 10:0.365134370468
9 11:0.564591327155
9 12:0.594182240688
9 13:0.247384883689
10 11:0.561907931814
10 12:0.609426657741
10 13:0.329698915481
11 12:0.110796728544
11 13:0.368887652655
12 13:0.393905233967
</hsp>