sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CPW-01276-01299
X
>3CCS-01276-01299
X
>3F1F-A1231-A1255
X
>1YJW-01276-01299
X
>1YIJ-01276-01299
X
>3CCM-01590-01587
X
>3CME-01590-01587
X
>1Z43-A74-A71
X
>1N8R-A1590-A1587
X
>3CCU-01590-01587
X
>1YJ9-01590-01587
X
>1VQO-01824-01821
X
>1VQK-01824-01821
X
</seq>
<hsp>
0 1:0.113529251804
0 2:0.348626518349
0 3:0.167961235896
0 4:0.128700945168
0 5:0.841235754502
0 6:0.877980030351
0 7:0.51670482077
0 8:0.957030119423
0 9:0.921780752449
0 10:0.759256072697
0 11:0.766516835674
0 12:0.774690344988
1 2:0.425388015505
1 3:0.176883171093
1 4:0.181517594814
1 5:0.809975122175
1 6:0.832883895598
1 7:0.485142670206
1 8:0.938812637069
1 9:0.891654514381
1 10:0.718465495417
1 11:0.743647914117
1 12:0.757220775124
2 3:0.450814678636
2 4:0.376648836193
2 5:0.918473277959
2 6:0.976339058022
2 7:0.537587355251
2 8:0.998084383998
2 9:1.0
2 10:0.863602892999
2 11:0.818313910781
2 12:0.810829697968
3 4:0.113109433688
3 5:0.857376229549
3 6:0.867852730878
3 7:0.579086512259
3 8:0.966314550849
3 9:0.930387247366
3 10:0.758714460875
3 11:0.794849938786
3 12:0.80244924997
4 5:0.800273457263
4 6:0.823883872634
4 7:0.517622548726
4 8:0.906051548451
4 9:0.877914205761
4 10:0.711660314294
4 11:0.732063292371
4 12:0.735032615645
5 6:0.214962398782
5 7:0.48338366221
5 8:0.201640712739
5 9:0.124945055409
5 10:0.191167900167
5 11:0.170791462296
5 12:0.168915556961
6 7:0.516945157475
6 8:0.34595663633
6 9:0.275020974429
6 10:0.168293128454
6 11:0.314406148331
6 12:0.311275569152
7 8:0.618174211193
7 9:0.578803714547
7 10:0.417736069692
7 11:0.404774804468
7 12:0.410680538956
8 9:0.151248181372
8 10:0.356601757497
8 11:0.271831063204
8 12:0.246817945852
9 10:0.262196606959
9 11:0.216733595157
9 12:0.22253920991
10 11:0.212018526646
10 12:0.228111231988
11 12:0.0606022215878
</hsp>