sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5H-51759-51596
X
>2UXC-A1282-A1307
X
>1OOA-C8-C21
X
>3CD6-0805-0782
X
>1VQ7-0805-0782
X
>3OI1-A22-A525
X
>1Q86-A15-A506
X
>1M90-A15-A506
X
>3I56-015-0506
X
>1FFK-015-0505
X
>3CCS-015-0506
X
>3R8T-A726-A703
X
</seq>
<hsp>
0 1:0.743841615433
0 2:0.969261321242
0 3:0.331627185115
0 4:0.305608360041
0 5:0.764064609664
0 6:0.571428528868
0 7:0.5279819641
0 8:0.531444667842
0 9:0.58570765156
0 10:0.600773171969
0 11:0.783646750377
1 2:0.624217615977
1 3:0.74758722069
1 4:0.713746913441
1 5:0.67890127064
1 6:0.447948287425
1 7:0.532985680362
1 8:0.522078730515
1 9:0.55852261689
1 10:0.596276479878
1 11:0.882220182509
2 3:0.894037026034
2 4:0.906528839623
2 5:0.711988589658
2 6:0.923192983553
2 7:0.925984328313
2 8:0.944722207958
2 9:0.999994731067
2 10:0.944475656137
2 11:0.935519215311
3 4:0.156804923995
3 5:0.594743618712
3 6:0.652252639886
3 7:0.633285484725
3 8:0.597379546716
3 9:0.64196522909
3 10:0.622292748978
3 11:0.570280555826
4 5:0.544834354498
4 6:0.578900044437
4 7:0.566622304107
4 8:0.524528286486
4 9:0.575015001483
4 10:0.559151194525
4 11:0.57669871102
5 6:0.752105411075
5 7:0.786456953364
5 8:0.742288734387
5 9:0.775324475144
5 10:0.708724446146
5 11:0.523032278761
6 7:0.155301339131
6 8:0.145168632341
6 9:0.164239790025
6 10:0.257691832621
6 11:0.795795192405
7 8:0.180477436752
7 9:0.206539373687
7 10:0.235346024673
7 11:0.79241730665
8 9:0.116938443367
8 10:0.214390732572
8 11:0.726071156466
9 10:0.170653835754
9 11:0.722532405552
10 11:0.615426295942
</hsp>