sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1KH6-A26-A23
X
>2UUA-A1146-A1143
X
>3CCR-02098-02095
X
>1YJ9-02719-02716
X
>3P22-G20-G17
X
>2QA4-992-989
X
>2UUB-A989-A986
X
>1Q86-A2098-A2095
X
</seq>
<hsp>
0 1:0.4673673211
0 2:0.356025280738
0 3:0.931893072554
0 4:0.999999532185
0 5:0.692613618894
0 6:0.734697219274
0 7:0.944223689989
1 2:0.338980814982
1 3:0.727872102362
1 4:0.824253143398
1 5:0.344959827636
1 6:0.55999812039
1 7:0.699635501947
2 3:0.725062461172
2 4:0.800931608198
2 5:0.518034106386
2 6:0.567390096488
2 7:0.728740411673
3 4:0.25711227264
3 5:0.497971329405
3 6:0.258708034474
3 7:0.222545404243
4 5:0.582741769391
4 6:0.302383102151
4 7:0.291397090682
5 6:0.357999130965
5 7:0.408019959029
6 7:0.271017472074
</hsp>