sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1Q81-A1017-A1014
X
>1K8A-A1017-A1014
X
>3CXC-01017-01014
X
>1VQ4-01017-01014
X
>2ZJR-X2385-X2382
X
>3CC7-02566-02594
X
</seq>
<hsp>
0 1:0.176860304772
0 2:0.159583860073
0 3:0.149997559666
0 4:0.353880355225
0 5:0.945916684626
1 2:0.259669023546
1 3:0.192267338132
1 4:0.244430251089
1 5:0.812533250055
2 3:0.132636184002
2 4:0.375956393912
2 5:0.999993820393
3 4:0.277250791215
3 5:0.907396126821
4 5:0.67407930415
</hsp>