sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3CCE-01032-01045
X
>3CMA-01032-01045
X
>3CCQ-01032-01045
X
>2QA4-01031-01044
X
>3CCU-01032-01045
X
>1VQ6-01032-01045
X
>3CPW-01032-01045
X
>3G6E-01032-01045
X
>3CCL-01032-01045
X
>3CCV-01032-01045
X
>3CCJ-01032-01045
X
>3G71-01032-01045
X
>3I56-01032-01045
X
</seq>
<hsp>
0 1:0.379042792012
0 2:0.277882239417
0 3:0.868237859254
0 4:0.260073893672
0 5:0.186530574728
0 6:0.198341756249
0 7:0.267635990254
0 8:0.3285674709
0 9:0.38585947785
0 10:0.417107246422
0 11:0.431052199398
0 12:0.458375135033
1 2:0.393157738733
1 3:0.999995673355
1 4:0.382470476781
1 5:0.234045513116
1 6:0.307355206679
1 7:0.374542241031
1 8:0.444597672177
1 9:0.371798408043
1 10:0.461632086866
1 11:0.526340687328
1 12:0.518849057714
2 3:0.75766896585
2 4:0.107947703401
2 5:0.249759134083
2 6:0.191705145895
2 7:0.194525825094
2 8:0.179084251359
2 9:0.194050431573
2 10:0.315610411838
2 11:0.264454551664
2 12:0.369487320646
3 4:0.72193429707
3 5:0.858901850422
3 6:0.773290663901
3 7:0.670470473892
3 8:0.668877579402
3 9:0.676589212601
3 10:0.67064309266
3 11:0.524943620327
3 12:0.485367503133
4 5:0.225481976786
4 6:0.147535615274
4 7:0.128888249716
4 8:0.120979074054
4 9:0.192385035674
4 10:0.340930453301
4 11:0.231886377119
4 12:0.315194804845
5 6:0.114242979127
5 7:0.221104033972
5 8:0.281514537986
5 9:0.278370670001
5 10:0.344909129147
5 11:0.403049711609
5 12:0.400898367239
6 7:0.133368778417
6 8:0.184014511438
6 9:0.217209893542
6 10:0.308866513371
6 11:0.319441055154
6 12:0.32749684457
7 8:0.153556792644
7 9:0.183326799384
7 10:0.284217227495
7 11:0.210828170082
7 12:0.231050729809
8 9:0.192138868658
8 10:0.326721184944
8 11:0.238467398605
8 12:0.292445247615
9 10:0.229124190358
9 11:0.220012516145
9 12:0.253893424632
10 11:0.335882306365
10 12:0.312366508144
11 12:0.18542645909
</hsp>