sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3FU2-A22-A2
X
>3CCR-01133-01159
X
>3CCE-01133-01159
X
>1VQN-01133-01159
X
>2QEX-01133-01159
X
>1VQM-01133-01159
X
>1VQO-01133-01159
X
>3G71-01133-01159
X
>1VQ4-01133-01159
X
</seq>
<hsp>
0 1:0.71240143032
0 2:0.725424917824
0 3:0.953179944523
0 4:0.999986028649
0 5:0.97766966701
0 6:0.924194675058
0 7:1.0
0 8:0.926730780696
1 2:0.0818641983388
1 3:0.419316802168
1 4:0.423340106278
1 5:0.406814157097
1 6:0.345254608228
1 7:0.426344080827
1 8:0.335506928113
2 3:0.388352939729
2 4:0.369473512225
2 5:0.368176922152
2 6:0.305179827368
2 7:0.374308441941
2 8:0.27178973241
3 4:0.199099981134
3 5:0.0879496926183
3 6:0.124236393591
3 7:0.245973223793
3 8:0.305929410808
4 5:0.125711020315
4 6:0.150184287114
4 7:0.128916819966
4 8:0.189706142415
5 6:0.0888925252237
5 7:0.164684578629
5 8:0.24384755355
6 7:0.174837134013
6 8:0.189508092991
7 8:0.176303590478
</hsp>