sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNK-A2775-A2625
X
>2ZJR-X2655-X2507
X
>3KNI-A2775-A2625
X
>3OH7-A2700-A2550
X
>3OH5-A2700-A2550
X
>3OI1-A2700-A2550
X
>3OHK-A2700-A2550
X
>3OHZ-A2700-A2550
X
>3OHJ-A2700-A2550
X
>2J03-A2747-A2597
X
>2J01-A2747-A2597
X
</seq>
<hsp>
0 1:0.837400448951
0 2:1.0
0 3:0.45840102419
0 4:0.475016116818
0 5:0.466325225932
0 6:0.525136018518
0 7:0.51614311043
0 8:0.55969556716
0 9:0.500684289304
0 10:0.50630723977
1 2:0.575365712828
1 3:0.560411774949
1 4:0.534152657461
1 5:0.488975710678
1 6:0.411340951057
1 7:0.431925495123
1 8:0.37524609517
1 9:0.537651351144
1 10:0.51887191391
2 3:0.612434959266
2 4:0.59985388163
2 5:0.630349951266
2 6:0.622692548678
2 7:0.587697261002
2 8:0.612223879014
2 9:0.719708996929
2 10:0.707597655808
3 4:0.0422432071739
3 5:0.318265525547
3 6:0.346847774091
3 7:0.318274086814
3 8:0.366893838698
3 9:0.32966438268
3 10:0.322812531898
4 5:0.311261354802
4 6:0.341728226205
4 7:0.30410958121
4 8:0.358582196179
4 9:0.330012736837
4 10:0.321583554921
5 6:0.234814757699
5 7:0.0969539138219
5 8:0.264564110187
5 9:0.379820516446
5 10:0.365806217438
6 7:0.234437517072
6 8:0.0915849359951
6 9:0.408414155875
6 10:0.392721306168
7 8:0.238558628105
7 9:0.366950368146
7 10:0.350933051422
8 9:0.377725914188
8 10:0.360815288189
9 10:0.0254045777024
</hsp>