sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2CT8-C17-C55
X
>2RE8-B15-B52
X
>2DU3-D16-D53
X
>2AZX-C16-C53
X
>2ZM5-D17-D54
X
>2ZXU-D17-D54
X
>1GAX-D16-D53
X
</seq>
<hsp>
0 1:0.714531163603
0 2:0.846236277654
0 3:0.814881964917
0 4:0.964892465171
0 5:1.0
0 6:0.872828563066
1 2:0.464025557439
1 3:0.348980035327
1 4:0.537503914084
1 5:0.582795441618
1 6:0.812266706765
2 3:0.262667523079
2 4:0.73717283661
2 5:0.765515449109
2 6:0.743091116537
3 4:0.567986377527
3 5:0.607416529582
3 6:0.680339719077
4 5:0.0907562294088
4 6:0.599158616995
5 6:0.602471319771
</hsp>