sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1E-A161-A138
X
>3F1F-A2734-A2738
X
>3F1H-A2734-A2738
X
>3G8T-S99-S120
X
>2ZJR-X2537-X2541
X
>3OHK-A2580-A2584
X
>3F1H-A2377-A2406
X
>3F1F-A2377-A2406
X
</seq>
<hsp>
0 1:0.552417394888
0 2:0.537756558896
0 3:0.810455996019
0 4:0.506143681572
0 5:0.694080317677
0 6:0.630449179744
0 7:0.640543228179
1 2:0.0205238627743
1 3:0.526665855992
1 4:0.7289975864
1 5:0.543724222039
1 6:0.767892394379
1 7:0.787127408378
2 3:0.52877153492
2 4:0.720378213633
2 5:0.535839562427
2 6:0.754420203051
2 7:0.773537684499
3 4:0.8013742416
3 5:0.641805615704
3 6:0.9131293704
3 7:0.923595098692
4 5:1.0
4 6:0.775327528698
4 7:0.773608756303
5 6:0.62146326451
5 7:0.640953670697
6 7:0.0385754625237
</hsp>