sequences=7
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1726-A1739
X
>3OI1-A496-A520
X
>3R8S-A481-A506
X
>3OH7-A496-A520
X
>3OH5-A496-A520
X
>3OHJ-A496-A520
X
>3OHK-A496-A520
X
</seq>
<hsp>
0 1:0.991245059108
0 2:0.624788181808
0 3:1.0
0 4:0.985614598634
0 5:0.973362977872
0 6:0.965473547908
1 2:0.706808131182
1 3:0.360419831939
1 4:0.363759603253
1 5:0.399128173523
1 6:0.370002734741
2 3:0.872269513038
2 4:0.852057830879
2 5:0.771152756604
2 6:0.752917615162
3 4:0.10007685916
3 5:0.33855547992
3 6:0.298806168202
4 5:0.282302471992
4 6:0.257993785603
5 6:0.0827515229937
</hsp>