sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1G-A600-A596
X
>3F1E-A600-A596
X
>1FJG-A600-A596
X
>3F1F-A1895-A1841
X
>1N32-A600-A596
X
>2UUB-A600-A596
X
>2UXC-A600-A596
X
>2VQF-A600-A596
X
>2UUA-A600-A596
X
</seq>
<hsp>
0 1:0.0626803847144
0 2:0.927506413343
0 3:0.883150393428
0 4:0.999989838336
0 5:0.784251450406
0 6:0.984570030954
0 7:0.999056792218
0 8:0.995308233296
1 2:0.890796488687
1 3:0.856474973141
1 4:0.960583241146
1 5:0.75130931225
1 6:0.939176963849
1 7:0.953188623426
1 8:0.95407787736
2 3:0.641116403029
2 4:0.545360255931
2 5:0.366381861696
2 6:0.429536799906
2 7:0.546774155357
2 8:0.646417764073
3 4:0.79723198861
3 5:0.384137257467
3 6:0.791869501292
3 7:0.786795968875
3 8:0.851666635115
4 5:0.52635677097
4 6:0.419655518826
4 7:0.32264658775
4 8:0.524098135741
5 6:0.504331780805
5 7:0.535038166302
5 8:0.582457205238
6 7:0.199316112315
6 8:0.284424773499
7 8:0.276057054581
</hsp>