sequences=17
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2J00-A1491-A1488
X
>3KNH-A941-A1328
X
>3U5B-2436-2433
X
>2ZJR-X2165-X2162
X
>2O3Y-A16-B5
X
>3B4A-B105-B78
X
>2HO6-B106-B79
X
>3B4C-B105-B78
X
>2GCV-B106-B79
X
>3SD3-A61-A58
X
>2H0W-B106-B79
X
>3SD1-A61-A58
X
>3B4B-B106-B79
X
>2H0S-B106-B79
X
>2GCS-B106-B79
X
>2H0Z-B106-B79
X
>2H0X-B106-B79
X
</seq>
<hsp>
0 1:0.543742237878
0 2:0.265544181489
0 3:0.562593934566
0 4:0.813503912811
0 5:0.679080539844
0 6:0.64254185551
0 7:0.662894411677
0 8:0.640616027957
0 9:0.582581013235
0 10:0.65179338084
0 11:0.587199578363
0 12:0.64508390522
0 13:0.627168965432
0 14:0.611882267554
0 15:0.689574758925
0 16:0.63354465758
1 2:0.561644722798
1 3:0.521787118372
1 4:0.999998714755
1 5:0.81564821957
1 6:0.754460895471
1 7:0.798694917911
1 8:0.742439900948
1 9:0.570241274022
1 10:0.746393807972
1 11:0.568271106434
1 12:0.769355605846
1 13:0.738132446801
1 14:0.685586328935
1 15:0.745408897027
1 16:0.708014004024
2 3:0.723435042791
2 4:0.885503259322
2 5:0.718418073831
2 6:0.709460962521
2 7:0.720904440827
2 8:0.699786887991
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2 15:0.793814157402
2 16:0.727533144658
3 4:0.655454421591
3 5:0.553824608908
3 6:0.4446119148
3 7:0.491781157928
3 8:0.452656939321
3 9:0.209113374958
3 10:0.416546916619
3 11:0.211176222514
3 12:0.444236278649
3 13:0.429824454691
3 14:0.362668439538
3 15:0.365640246498
3 16:0.352772596028
4 5:0.265248828892
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4 8:0.313052245925
4 9:0.582618523792
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4 11:0.553825351133
4 12:0.26374876828
4 13:0.312833623393
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4 15:0.352859728525
4 16:0.34178264993
5 6:0.133028898516
5 7:0.143396294928
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5 9:0.425864053349
5 10:0.172489144468
5 11:0.395895013188
5 12:0.129390170939
5 13:0.136602202022
5 14:0.199202985932
5 15:0.251601743825
5 16:0.218922235397
6 7:0.0785457895005
6 8:0.0431347401023
6 9:0.323867442694
6 10:0.0507490928944
6 11:0.297420542618
6 12:0.0682684667629
6 13:0.0636560125531
6 14:0.115531751266
6 15:0.174533666364
6 16:0.122498518039
7 8:0.0971528768521
7 9:0.360118789264
7 10:0.0916265234883
7 11:0.342332904176
7 12:0.126902650162
7 13:0.109875934373
7 14:0.18111479861
7 15:0.229426456201
7 16:0.184158085104
8 9:0.323323157694
8 10:0.069470669976
8 11:0.294118785631
8 12:0.0788537907663
8 13:0.0483573197905
8 14:0.10734638221
8 15:0.176042220786
8 16:0.12788342779
9 10:0.288497069755
9 11:0.0541366555887
9 12:0.3379159227
9 13:0.304534573806
9 14:0.25002681996
9 15:0.26157720824
9 16:0.255108148802
10 11:0.26440503178
10 12:0.0942147885768
10 13:0.0691951474171
10 14:0.105920785924
10 15:0.15007407527
10 16:0.104858293129
11 12:0.30673229558
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11 14:0.211850679578
11 15:0.22518998952
11 16:0.218486480481
12 13:0.0737089123459
12 14:0.107447401761
12 15:0.147980059028
12 16:0.107878181673
13 14:0.0853870963443
13 15:0.153140772151
13 16:0.102447833008
14 15:0.108231939859
14 16:0.0492032178533
15 16:0.0847677798715
</hsp>