sequences=16
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>2AZX-D13-D7
X
>3G71-02541-02532
X
>3OH7-A171-A187
X
>1XMQ-A429-A473
X
>2OTL-01640-01654
X
>2OTJ-02104-02088
X
>3R8T-A309-A305
X
>1N32-A196-A169
X
>1VQ8-02622-02628
X
>3KNI-A2570-A2561
X
>1N32-A317-A313
X
>1VQL-02622-02628
X
>3OHD-A511-A494
X
>2VQE-A317-A313
X
>2VQF-A317-A313
X
>3R8S-A331-A327
X
</seq>
<hsp>
0 1:0.48458249541
0 2:0.788111114331
0 3:0.503986197264
0 4:0.479642015806
0 5:0.564310998121
0 6:0.700631360814
0 7:0.623860636152
0 8:0.691130565133
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0 10:0.731209205078
0 11:0.673865336134
0 12:0.825147318816
0 13:0.705121275997
0 14:0.666695879796
0 15:1.0
1 2:0.51671584222
1 3:0.442045883363
1 4:0.38719808737
1 5:0.488285189444
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1 10:0.585513896228
1 11:0.555409707067
1 12:0.722879051151
1 13:0.603726380991
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1 15:0.944296863705
2 3:0.408485120045
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3 7:0.730850752029
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3 11:0.448536868209
3 12:0.745229945505
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3 15:0.747109320275
4 5:0.26574929425
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8 10:0.237295581356
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8 15:0.544421499125
9 10:0.407682566425
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10 14:0.234215695358
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11 12:0.651201045324
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11 15:0.51639537625
12 13:0.664749865208
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12 15:0.616555889683
13 14:0.126356685526
13 15:0.468575662053
14 15:0.499098298567
</hsp>