sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61452-61450
X
>3U5B-21440-21438
X
>3CCM-01592-01528
X
>1VQK-01592-01528
X
>3CMA-01592-01528
X
>1VQM-01592-01528
X
>1VQL-01592-01528
X
>3CC2-01592-01528
X
>1VQ6-01592-01528
X
</seq>
<hsp>
0 1:0.118964732287
0 2:0.949479327108
0 3:0.963540129897
0 4:0.954723825367
0 5:0.947049986451
0 6:0.949955445047
0 7:0.94955215706
0 8:0.95579723686
1 2:0.985608196083
1 3:1.0
1 4:0.98780006432
1 5:0.981534062331
1 6:0.98605909247
1 7:0.987101261666
1 8:0.988831310192
2 3:0.0241306252438
2 4:0.0340114170557
2 5:0.0371842194156
2 6:0.0322598747303
2 7:0.0520635448695
2 8:0.0623171694659
3 4:0.0348403930144
3 5:0.0505938283892
3 6:0.0407151323115
3 7:0.0669182289186
3 8:0.0693006626128
4 5:0.0460521708688
4 6:0.049256968957
4 7:0.0678599613522
4 8:0.0529578203564
5 6:0.0254198147539
5 7:0.0509464315718
5 8:0.0636286824351
6 7:0.0580995586133
6 8:0.0799043325221
7 8:0.0616918422662
</hsp>