sequences=18
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3OHC-A47-A46
X
>3OHD-A47-A46
X
>3U5B-247-246
X
>3KNI-A1211-A1209
X
>1XMQ-A47-A46
X
>3OGE-A47-A46
X
>3F1F-A1275-A1273
X
>3F1H-A1275-A1273
X
>3U5F-647-646
X
>3OGY-A47-A46
X
>3OHY-A47-A46
X
>2J00-A47-A46
X
>2UUB-A47-A46
X
>2J02-A47-A46
X
>2UXC-A47-A46
X
>3OI0-A47-A46
X
>1N32-A47-A46
X
>1FJG-A47-A46
X
</seq>
<hsp>
0 1:0.00488790294681
0 2:0.0858683270364
0 3:0.997272351929
0 4:0.0329718254052
0 5:0.0312395909818
0 6:0.99399811856
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0 12:0.0235419298142
0 13:0.0205910682333
0 14:0.0412138271612
0 15:0.0196430913144
0 16:0.0390203219663
0 17:0.0287836721705
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1 5:0.0306010110393
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1 17:0.0252571387696
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6 7:0.00220726977052
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8 9:0.0702403164886
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9 10:0.0262611404357
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14 15:0.0428302379701
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14 17:0.0384522720773
15 16:0.0376880405986
15 17:0.0266364195012
16 17:0.0367796853445
</hsp>