sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>361D-B10-B11
X
>2QA4-0806-0843
X
>2ZJR-X663-X698
X
>3I56-0807-0844
X
>3U5D-1804-1840
X
>3CCJ-0807-0844
X
>3U5H-5810-5846
X
>1YJW-0807-0844
X
</seq>
<hsp>
0 1:0.907693404217
0 2:1.0
0 3:0.937465226902
0 4:0.930839523807
0 5:0.955438444411
0 6:0.948940484921
0 7:0.931332335479
1 2:0.264360035336
1 3:0.119831567179
1 4:0.101857762337
1 5:0.111016795671
1 6:0.141158676449
1 7:0.132539658267
2 3:0.155488615244
2 4:0.246563432841
2 5:0.177058717288
2 6:0.203462150577
2 7:0.1646288128
3 4:0.109197335626
3 5:0.0481391850215
3 6:0.0889246828907
3 7:0.0363901489083
4 5:0.0847709791338
4 6:0.0595201348861
4 7:0.105953665546
5 6:0.072303239553
5 7:0.057989311631
6 7:0.0823335283988
</hsp>