sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1M90-A1198-A1037
X
>1JJ2-01198-01037
X
>1YI2-01198-01037
X
>1NJI-A1198-A1037
X
>1S72-01198-01037
X
>1N8R-A1198-A1037
X
>1QVG-01198-01037
X
>1FFK-01151-01036
X
</seq>
<hsp>
0 1:0.311735164763
0 2:0.414469849592
0 3:0.360965679014
0 4:0.291733612235
0 5:0.860483890904
0 6:0.520984754182
0 7:0.50823126293
1 2:0.564725055338
1 3:0.324584329413
1 4:0.118366066022
1 5:0.817177706381
1 6:0.613119342908
1 7:0.437774875478
2 3:0.576782596685
2 4:0.570005572116
2 5:0.817431111457
2 6:0.374949169551
2 7:0.607968351051
3 4:0.297234659374
3 5:0.999985416509
3 6:0.685981024336
3 7:0.642046359358
4 5:0.910739150425
4 6:0.640617347965
4 7:0.485281527231
5 6:0.665916922335
5 7:0.55480600952
6 7:0.453405961904
</hsp>