sequences=13
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3U5F-61194-61193
X
>3R8T-A1121-A2482
X
>3R8S-A1121-A2483
X
>3F1E-A322-A321
X
>3F1G-A322-A321
X
>2J02-A322-A321
X
>2VQE-A322-A321
X
>1N32-A322-A321
X
>2UUA-A322-A321
X
>2UUB-A322-A321
X
>1XMQ-A322-A321
X
>2VQF-A322-A321
X
>1FJG-A322-A321
X
</seq>
<hsp>
0 1:0.944628950294
0 2:0.892272163173
0 3:0.561337900997
0 4:0.564148708943
0 5:0.579902242111
0 6:0.574718378608
0 7:0.573156088539
0 8:0.580317143423
0 9:0.56325867058
0 10:0.558757312887
0 11:0.583463427369
0 12:0.579054772743
1 2:0.120307861551
1 3:0.944988072875
1 4:0.944526502893
1 5:0.930958278265
1 6:0.970378228934
1 7:0.999997390311
1 8:0.960366864214
1 9:0.973316801448
1 10:0.996498368085
1 11:0.970248835746
1 12:0.986843181449
2 3:0.894093929246
2 4:0.894131979914
2 5:0.876115427816
2 6:0.9150048039
2 7:0.942511551783
2 8:0.906050231118
2 9:0.920740957329
2 10:0.942008807682
2 11:0.915623720419
2 12:0.93201917484
3 4:0.00606098964045
3 5:0.0691008979728
3 6:0.063273727977
3 7:0.0984252464479
3 8:0.0531769450744
3 9:0.0455651572992
3 10:0.075120966337
3 11:0.0676458201705
3 12:0.0720772562656
4 5:0.0691452709284
4 6:0.0651102654694
4 7:0.0999827562749
4 8:0.0539323547478
4 9:0.0469257650406
4 10:0.0776736405567
4 11:0.0683221806956
4 12:0.0737187653017
5 6:0.0649261243646
5 7:0.0913089518778
5 8:0.0465401816534
5 9:0.0669917673234
5 10:0.0882694380153
5 11:0.0525632942332
5 12:0.073179607715
6 7:0.0543482247187
6 8:0.024705433713
6 9:0.0370742008984
6 10:0.0467189607157
6 11:0.0238464708527
6 12:0.0264717949899
7 8:0.0628110162017
7 9:0.059759955287
7 10:0.0464882400186
7 11:0.0555413332902
7 12:0.0477150422127
8 9:0.0350837362688
8 10:0.0541853498135
8 11:0.0181774309238
8 12:0.032629138713
9 10:0.035181788265
9 11:0.0388633547274
9 12:0.0371796601846
10 11:0.0502448166669
10 12:0.0333028857984
11 12:0.0256647071231
</hsp>