sequences=12
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3KNI-A1844-A1821
X
>3F1H-A1923-A1900
X
>3U5D-12079-12056
X
>3F1F-A1923-A1900
X
>3OH7-A1845-A1822
X
>3OI1-A1845-A1822
X
>3OH5-A1845-A1822
X
>3OHZ-A1845-A1822
X
>3OHJ-A1845-A1822
X
>3OHK-A1845-A1822
X
>2J03-A1845-A1822
X
>2J01-A1845-A1822
X
</seq>
<hsp>
0 1:0.40851178185
0 2:0.999996370558
0 3:0.421787990267
0 4:0.545550081893
0 5:0.514558586322
0 6:0.524407214798
0 7:0.500849600112
0 8:0.574045303293
0 9:0.586058405046
0 10:0.69319480498
0 11:0.708052920852
1 2:0.669724715112
1 3:0.0324060720039
1 4:0.32250746642
1 5:0.308228182379
1 6:0.306912112907
1 7:0.297159514787
1 8:0.26488566821
1 9:0.262758988779
1 10:0.392558359666
1 11:0.403205477617
2 3:0.667424400412
2 4:0.653884880616
2 5:0.648545613988
2 6:0.658147330686
2 7:0.654000490517
2 8:0.565097146556
2 9:0.569649093855
2 10:0.69824841365
2 11:0.693203152765
3 4:0.32160946082
3 5:0.307853709028
3 6:0.307631023167
3 7:0.295364011204
3 8:0.262576683968
3 9:0.260369234972
3 10:0.385609472774
3 11:0.396049836497
4 5:0.0655574649537
4 6:0.0426638334372
4 7:0.0873664965763
4 8:0.136122312042
4 9:0.152641393735
4 10:0.364925991764
4 11:0.366986622291
5 6:0.0638588084451
5 7:0.0354674633345
5 8:0.147996737176
5 9:0.173909359673
5 10:0.389975083818
5 11:0.393648923896
6 7:0.0766534035609
6 8:0.127289986669
6 9:0.147497066532
6 10:0.378678534849
6 11:0.380657805166
7 8:0.15059687022
7 9:0.178351379511
7 10:0.401559813663
7 11:0.405255486895
8 9:0.0409244123903
8 10:0.344227193279
8 11:0.343266381074
9 10:0.327422572345
9 11:0.32606254588
10 11:0.0242346689623
</hsp>