sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1E-A1419-A1420
X
>3F1G-A1419-A1420
X
>3KNK-A979-A977
X
>3OHJ-A974-A972
X
>3OI1-A974-A972
X
>3OHK-A974-A972
X
>3OH5-A974-A972
X
>3OHZ-A974-A972
X
>3KNI-A980-A978
X
>3OH7-A974-A972
X
>2ZJR-X887-X885
X
</seq>
<hsp>
0 1:0.00561150319356
0 2:0.960371031285
0 3:0.972029711397
0 4:1.0
0 5:0.97691747198
0 6:0.965729564743
0 7:0.986664530832
0 8:0.952284948842
0 9:0.972798097717
0 10:0.957466871526
1 2:0.957237519989
1 3:0.969185690141
1 4:0.996845557329
1 5:0.974021392595
1 6:0.962953728408
1 7:0.983570753619
1 8:0.949397595113
1 9:0.969982706258
1 10:0.954845718179
2 3:0.119196660999
2 4:0.0815335911927
2 5:0.109228103168
2 6:0.1317859506
2 7:0.081280687365
2 8:0.121194260081
2 9:0.118381706761
2 10:0.216595843652
3 4:0.11157405481
3 5:0.0211063681613
3 6:0.0386393969961
3 7:0.0998002600467
3 8:0.0559161293598
3 9:0.0312798032198
3 10:0.127429565627
4 5:0.10723901796
4 6:0.123810473286
4 7:0.0235187996491
4 8:0.112271340288
4 9:0.112843207573
4 10:0.225961341377
5 6:0.0536664136001
5 7:0.0987722408954
5 8:0.0644618527559
5 9:0.0404610266833
5 10:0.13165471799
6 7:0.109027393164
6 8:0.0474042563171
6 9:0.01930365756
6 10:0.129862078721
7 8:0.0970531932049
7 9:0.100001161824
7 10:0.215953171919
8 9:0.047155722377
8 10:0.133130731007
9 10:0.133098074769
</hsp>