sequences=8
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3R8N-A330-A329
X
>3OI0-A322-A321
X
>3OHY-A322-A321
X
>3OHD-A322-A321
X
>3OGY-A322-A321
X
>3OGE-A322-A321
X
>3OHC-A322-A321
X
>3KNH-A313-A312
X
</seq>
<hsp>
0 1:0.773421362174
0 2:0.794026444556
0 3:0.592285182741
0 4:0.628197835828
0 5:0.655972382519
0 6:0.584123199807
0 7:0.723940141634
1 2:0.0832047975311
1 3:0.373311809798
1 4:0.478172043632
1 5:0.503392481471
1 6:0.364287926625
1 7:0.829573456312
2 3:0.4111918917
2 4:0.490012530972
2 5:0.505786424479
2 6:0.392918886174
2 7:0.83944495963
3 4:0.516611337898
3 5:0.548844016761
3 6:0.0670902810505
3 7:0.570912171989
4 5:0.0706877299589
4 6:0.480543957941
4 7:0.97503775566
5 6:0.506908109198
5 7:1.0
6 7:0.588250202886
</hsp>