sequences=11
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1N32-A72-A73
X
>2QA4-01033-01034
X
>3D2V-B8-B9
X
>1KXK-A11-A12
X
>1VQ5-9108-9109
X
>2ZJR-X808-X809
X
>2ZJR-X971-X972
X
>3CPW-081-082
X
>1YJN-081-082
X
>3KNI-A708-A709
X
>3OHJ-A1433-A1434
X
</seq>
<hsp>
0 1:0.655465711499
0 2:0.553998617416
0 3:0.999996835986
0 4:0.555665227954
0 5:0.65980831633
0 6:0.494180375672
0 7:0.703326604995
0 8:0.637872827727
0 9:0.653903893713
0 10:0.853524941341
1 2:0.360885333593
1 3:0.516752727512
1 4:0.384913840568
1 5:0.352085953644
1 6:0.3516296435
1 7:0.340929669219
1 8:0.306373182397
1 9:0.534496864688
1 10:0.543383537664
2 3:0.509260502009
2 4:0.127107775776
2 5:0.328635594614
2 6:0.447557437119
2 7:0.239235732756
2 8:0.188977385331
2 9:0.288332910349
2 10:0.44196492041
3 4:0.489224055827
3 5:0.640683979121
3 6:0.77364939055
3 7:0.434121634273
3 8:0.469268811151
3 9:0.49936414199
3 10:0.468491703937
4 5:0.401244170016
4 6:0.506441105641
4 7:0.267220854727
4 8:0.209392563737
4 9:0.254386170499
4 10:0.505824670377
5 6:0.442559358312
5 7:0.248633695755
5 8:0.231122547306
5 9:0.490435337516
5 10:0.559413497472
6 7:0.53349825406
6 8:0.482028290921
6 9:0.623153466281
6 10:0.57870626275
7 8:0.0926745167129
7 9:0.312715043637
7 10:0.454594390774
8 9:0.304690146344
8 10:0.478966461166
9 10:0.450961367139
</hsp>