sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1JJ2-02593-02594
X
>2R8S-R47-R48
X
>3R8T-A2322-A2323
X
>3F1H-A2438-A2439
X
>1HR2-A72-A73
X
>3F1E-A1285-A1286
X
>3CD6-01806-01807
X
>3CCL-01806-01807
X
>3CCE-01806-01807
X
</seq>
<hsp>
0 1:0.447540692118
0 2:0.550405069384
0 3:0.487654728662
0 4:0.409697393718
0 5:0.592152283586
0 6:0.999993245892
0 7:0.938257111488
0 8:0.94591724944
1 2:0.753746269825
1 3:0.350329215361
1 4:0.600509217949
1 5:0.601790474579
1 6:0.947503495735
1 7:0.838143839138
1 8:0.806203325606
2 3:0.641335162731
2 4:0.289074341751
2 5:0.393170743634
2 6:0.689321622098
2 7:0.665513191063
2 8:0.693699849322
3 4:0.461595610718
3 5:0.517730415105
3 6:0.772284150656
3 7:0.722677595192
3 8:0.705709263762
4 5:0.461387632813
4 6:0.757563208716
4 7:0.726759869746
4 8:0.737255411436
5 6:0.459337455105
5 7:0.386523309317
5 8:0.414243315676
6 7:0.195947610334
6 8:0.268540327026
7 8:0.102030270763
</hsp>