sequences=9
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>1YJN-01905-01906
X
>3KNK-B83-B84
X
>3KNH-A1390-A1391
X
>3KNI-A534-A535
X
>3F1E-A606-A607
X
>3OGY-A570-A571
X
>3R1E-B5-B6
X
>1ZFV-B9-B10
X
>3KNH-A1187-A1188
X
</seq>
<hsp>
0 1:0.647189585024
0 2:0.56631192541
0 3:0.441879757319
0 4:0.878314987574
0 5:0.661410779672
0 6:0.528569987005
0 7:0.743237539029
0 8:0.655522656404
1 2:0.427134740192
1 3:0.656775426157
1 4:1.0
1 5:0.341495724136
1 6:0.73439102505
1 7:0.732374689189
1 8:0.685636668684
2 3:0.364659471227
2 4:0.985574101438
2 5:0.493616613127
2 6:0.621474704445
2 7:0.755577715452
2 8:0.669984810521
3 4:0.844505715107
3 5:0.640233446714
3 6:0.480095804475
3 7:0.684121210936
3 8:0.563888377541
4 5:0.994969242441
4 6:0.455640621892
4 7:0.336367818738
4 8:0.648026854824
5 6:0.679571431127
5 7:0.699274166508
5 8:0.594309194033
6 7:0.329293813794
6 8:0.426672571557
7 8:0.399236252505
</hsp>