sequences=6
<param>
maxmove=0.1
pval=0.1
usescval=false
complexatt=true
cooling=1.0
currcool=1.0
attfactor=10.0
attvalpow=1
repfactor=10.0
repvalpow=1
dampening=1.0
minattract=1.0
cluster2d=false
blastpath=/home/sdh/apps/blast-2.2.17/bin/blastall -p blastp -M PAM70 -F F -e 10000 -b 500 -v 500
formatdbpath=/home/sdh/apps/blast-2.2.17/bin/formatdb
showinfo=true
zoom=1.0
dotsize=0
ovalsize=10
groupsize=4
usefoldchange=false
avgfoldchange=false
colorcutoffs=0.0;0.1;0.2;0.3;0.4;0.5;0.6;0.7;0.8;0.9;
colorarr=(230;230;230):(207;207;207):(184;184;184):(161;161;161):(138;138;138):(115;115;115):(92;92;92):(69;69;69):(46;46;46):(23;23;23):
</param>
<rotmtx>
1.0;0.0;0.0;
0.0;1.0;0.0;
0.0;0.0;1.0;
</rotmtx>
<seq>
>3F1H-A758-A759
X
>2H0Z-B78-B79
X
>3OH5-A2473-A2474
X
>3OH7-A2473-A2474
X
>2J03-A2132-A2133
X
>3F1F-A74-A75
X
</seq>
<hsp>
0 1:0.639095360458
0 2:0.837378593636
0 3:0.859095427854
0 4:0.999999444252
0 5:0.858083935651
1 2:0.528068175029
1 3:0.519398419896
1 4:0.678415287505
1 5:0.405071391592
2 3:0.0528043427587
2 4:0.443572171112
2 5:0.279674817945
3 4:0.437644588762
3 5:0.263711546096
4 5:0.380170852396
</hsp>